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GrainGenes Marker Report: POPA2_0484

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Locus
POPA2_0484
Type
SNP
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_1640
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0484
Most representative HarvEST:Barley Assembly #32 Unigene = 3137
Most representative HarvEST:Barley Assembly #35 Unigene = 1640
HarvEST Unigene 35 Probe Set = Contig4467_at
Unigene 35 Rice Locus = LOC_Os01g18630
Description for best rice BLAST hit to Unigene 35 member = retrotransposon protein, putative, SINE subclass, expressed; E value = 0
BLAST hit in the rice genome = retrotransposon protein, putative, SINE subclass, expressed



Probe for Locus
HAR35_1640
Locus
POPA2_0484