Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: POPA2_0513

[Submit comment/correction]

Locus	POPA2_0513
Type	SNP
Synonym	Other name 11_20513 BOPA1_11_20513 BOPA1_3272-1578 Synonym 11_20513
Chromosome	4H
Chromosome Arm	4HL
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_1778 i_11_20513
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0513 Marker name in barley OPA1 = 11_20513 Original SNP name = 3272-1578 Most representative HarvEST:Barley Assembly #32 Unigene = 3272 Most representative HarvEST:Barley Assembly #35 Unigene = 1778 HarvEST Unigene 35 Probe Set = Contig4612_at Unigene 35 Rice Locus = LOC_Os03g07480 Description for best rice BLAST hit to Unigene 35 member = sucrose Transporter, putative, expressed; E value = 0 BLAST hit in the rice genome = sucrose Transporter, putative, expressed
Probe for Locus	HAR35_1778
Locus	POPA2_0513