GrainGenes Marker Report: POPA2_0582
Locus
POPA2_0582
Type
SNP
Synonym
Synonym 11_20582
Chromosome
5H
Map
Hordeum-OPAConsensus-2011-5H 6.36
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Probe
HAR35_16398
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0582 Marker name in barley OPA1 = 11_20582 Original SNP name = 3557-547 Most representative HarvEST:Barley Assembly #32 Unigene = 3557 Most representative HarvEST:Barley Assembly #35 Unigene = 16398 HarvEST Unigene 35 Probe Set = Contig4967_at; Contig4967_s_at Unigene 35 Rice Locus = LOC_Os12g44000 Description for best rice BLAST hit to Unigene 35 member = ubiquitin-conjugating enzyme E2 W, putative, expressed; E value = 7E-90 BLAST hit in the rice genome = ubiquitin-conjugating enzyme E2 W, putative, expressed
Probe for Locus
HAR35_16398
Locus
POPA2_0582
GrainGenes Marker Report: POPA2_0582
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