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GrainGenes Marker Report: POPA2_0634

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Locus	POPA2_0634
Type	SNP
Chromosome	2H
Chromosome Arm	2HL
Map	Barley-Core-2014_2H 125.08 Hordeum-OPA-2009-2H 112.91 Hordeum-OPA123-2008-2H 112.91 Hordeum-OPAConsensus-2011-2H 118.39
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe	HAR35_2209
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_0634 Most representative HarvEST:Barley Assembly #32 Unigene = 3841 Most representative HarvEST:Barley Assembly #35 Unigene = 2209 HarvEST Unigene 35 Probe Set = Contig5380_s_at Unigene 35 Rice Locus = LOC_Os04g52900 Description for best rice BLAST hit to Unigene 35 member = multidrug resistance-associated protein 2, putative, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_0634 Original SNP name = 3841-2363 Description for best rice BLAST hit to Unigene 35 member = protein multidrug resistance-associated protein 2, putative, expressed; E value = 0 BLAST hit in the rice genome = multidrug resistance-associated protein 2, putative, expressed
Probe for Locus	HAR35_2209
Locus	POPA2_0634
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare