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GrainGenes Marker Report: POPA2_0756

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Locus	POPA2_0756
Type	SNP
Chromosome	6H
Chromosome Arm	6HL
Map	Barley-Core-2014_6H 75.16 Hordeum-OPA-2009-6H 71.08 Hordeum-OPA123-2008-6H 71.08 Hordeum-OPAConsensus-2011-6H 81.79
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe	HAR35_1731
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0756 Most representative HarvEST:Barley Assembly #32 Unigene = 4510 Most representative HarvEST:Barley Assembly #35 Unigene = 1731 HarvEST Unigene 35 Probe Set = Contig6168_at; HVSMEn0016F09r2_s_at Unigene 35 Rice Locus = LOC_Os02g49700 Description for best rice BLAST hit to Unigene 35 member = homeodomain leucine zipper protein CPHB-5, putative, expressed; E value = 1E-131 Marker name in barley Pilot OPA2 = 2_0756 Original SNP name = 4510-1586 HarvEST Unigene 35 Probe Set = Contig6168_at, HVSMEn0016F09r2_s_at Description for best rice BLAST hit to Unigene 35 member = protein homeodomain leucine zipper protein CPHB-5, putative, expressed; E value = 1E-131 BLAST hit in the rice genome = homeodomain leucine zipper protein CPHB-5, putative, expressed
Probe for Locus	HAR35_1731
Locus	POPA2_0756
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare