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GrainGenes Marker Report: POPA2_0774

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Locus	POPA2_0774
Type	SNP
Chromosome	2H
Chromosome Arm	2HS
Map	Hordeum-OPA-2009-2H 9.28 Hordeum-OPA123-2008-2H 9.28
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_16709
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0774 Most representative HarvEST:Barley Assembly #32 Unigene = 4608 Most representative HarvEST:Barley Assembly #35 Unigene = 16709 HarvEST Unigene 35 Probe Set = Contig6465_at; HVSMEf0018G20r2_s_at Unigene 35 Rice Locus = LOC_Os01g71770 Description for best rice BLAST hit to Unigene 35 member = heterogeneous nuclear ribonucleoprotein 27C, putative, expressed; E value = 1E-164 Marker name in barley Pilot OPA2 = 2_0774 Original SNP name = 4608-1111 HarvEST Unigene 35 Probe Set = Contig6465_at, HVSMEf0018G20r2_s_at Description for best rice BLAST hit to Unigene 35 member = protein heterogeneous nuclear ribonucleoprotein 27C, putative, expressed; E value = 1E-164 BLAST hit in the rice genome = heterogeneous nuclear ribonucleoprotein 27C, putative, expressed
Probe for Locus	HAR35_16709
Locus	POPA2_0774
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare