Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: POPA2_0775

[Submit comment/correction]

Locus	POPA2_0775
Type	SNP
Synonym	Other name 12_20775 BOPA2_12_20775 Synonym 12_20775
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_16693 i_12_20775
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 2_0775 Marker name in barley OPA1 = 12_20775 Original SNP name = 4612-594 Most representative HarvEST:Barley Assembly #32 Unigene = 4612 Most representative HarvEST:Barley Assembly #35 Unigene = 16693 HarvEST Unigene 35 Probe Set = Contig6232_at Unigene 35 Rice Locus = LOC_Os05g23600 BLAST hit in the rice genome = dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed
Probe for Locus	HAR35_16693
Locus	POPA2_0775