Query (optional)   in Class  

GrainGenes Marker Report: POPA2_0788

Locus
POPA2_0788
Type
SNP
Chromosome
3H
Map
Barley-Core-2014_3H129.59
Hordeum-OPAConsensus-2011-3H150.11
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_672
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0788
Most representative HarvEST:Barley Assembly #32 Unigene = 4667
Most representative HarvEST:Barley Assembly #35 Unigene = 672
HarvEST Unigene 35 Probe Set = Contig6309_at
Unigene 35 Rice Locus = LOC_Os02g15700
Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 1E-31
BLAST hit in the rice genome = expressed protein



Probe for Locus
HAR35_672
Locus
POPA2_0788