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GrainGenes Marker Report: POPA2_0789

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Locus
POPA2_0789
Type
SNP
Chromosome
1H
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_16900
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0789
Most representative HarvEST:Barley Assembly #32 Unigene = 4670
Most representative HarvEST:Barley Assembly #35 Unigene = 16900
HarvEST Unigene 35 Probe Set = HT08H03u_s_at
Unigene 35 Rice Locus = LOC_Os05g41460
Description for best rice BLAST hit to Unigene 35 member = cysteine proteinase inhibitor 2, putative, expressed; E value = 3E-40
BLAST hit in the rice genome = cysteine proteinase inhibitor 2, putative, expressed



Probe for Locus
HAR35_16900
Locus
POPA2_0789