GrainGenes Marker Report: POPA2_0792
Locus
POPA2_0792
Type
SNP
Synonym
Other name 11_20792 BOPA1_11_20792 BOPA1_4691-721 Synonym 11_20792
Chromosome
1H
Chromosome Arm
1HL
Map
Hordeum-OPA-2009-1H 90.97 Hordeum-OPA123-2008-1H 90.97 Hordeum-OPAConsensus-2011-1H 92.43
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_16783 i_11_20792
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0792 Marker name in barley OPA1 = 11_20792 Original SNP name = 4691-721 Most representative HarvEST:Barley Assembly #32 Unigene = 4691 Most representative HarvEST:Barley Assembly #35 Unigene = 16783 HarvEST Unigene 35 Probe Set = Contig6579_at Unigene 35 Rice Locus = LOC_Os05g37390 Description for best rice BLAST hit to Unigene 35 member = protein G10 homolog 2, putative, expressed; E value = 5E-84 Marker name in barley Pilot OPA2 = 2_0792 Description for best rice BLAST hit to Unigene 35 member = protein protein G10 homolog 2, putative, expressed; E value = 5E-84 BLAST hit in the rice genome = protein G10 homolog 2, putative, expressed
Probe for Locus
HAR35_16783
Locus
POPA2_0792
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0792
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