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GrainGenes Marker Report: POPA2_0814

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Locus	POPA2_0814
Type	SNP
Chromosome	2H
Chromosome Arm	2HL
Map	Hordeum-OPA-2009-2H 150.67 Hordeum-OPA123-2008-2H 150.67
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_16977
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_0814 Most representative HarvEST:Barley Assembly #32 Unigene = 4802 Most representative HarvEST:Barley Assembly #35 Unigene = 16977 HarvEST Unigene 35 Probe Set = Contig6589_at Unigene 35 Rice Locus = LOC_Os04g57520 Description for best rice BLAST hit to Unigene 35 member = UBX domain-containing protein 7, putative, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_0814 Original SNP name = 4802-1307 Description for best rice BLAST hit to Unigene 35 member = protein UBX domain-containing protein 7, putative, expressed; E value = 0 BLAST hit in the rice genome = UBX domain-containing protein 7, putative, expressed
Probe for Locus	HAR35_16977
Locus	POPA2_0814
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare