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GrainGenes Marker Report: POPA2_0836

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Locus	POPA2_0836
Type	SNP
Chromosome	1H
Chromosome Arm	1HS
Map	Hordeum-OPA-2009-1H 1.51 Hordeum-OPA123-2008-1H 1.51
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_298
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0836 Most representative HarvEST:Barley Assembly #32 Unigene = 491 Most representative HarvEST:Barley Assembly #35 Unigene = 298 HarvEST Unigene 35 Probe Set = Contig245_s_at Unigene 35 Rice Locus = LOC_Os07g40900 Description for best rice BLAST hit to Unigene 35 member = vegetative cell wall protein gp1 precursor, putative, expressed; E value = 2E-30 Marker name in barley Pilot OPA2 = 2_0836 Original SNP name = 491-1048 Original SNP name = U32_7636_1701 Description for best rice BLAST hit to Unigene 35 member = protein vegetative cell wall protein gp1 precursor, putative, expressed; E value = 2E-30 BLAST hit in the rice genome = vegetative cell wall protein gp1 precursor, putative, expressed
Probe for Locus	HAR35_298
Locus	POPA2_0836
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare