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GrainGenes Marker Report: POPA2_0839

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Locus	POPA2_0839
Type	SNP
Synonym	Other name 12_20839 BOPA2_12_20839 Synonym 12_20839
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_16778 i_12_20839
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0839 Marker name in barley OPA1 = 12_20839 Original SNP name = 4922-501 Most representative HarvEST:Barley Assembly #32 Unigene = 4922 Most representative HarvEST:Barley Assembly #35 Unigene = 16778 HarvEST Unigene 35 Probe Set = Contig6643_s_at Unigene 35 Rice Locus = LOC_Os07g26700 Description for best rice BLAST hit to Unigene 35 member = brain protein 44, putative, expressed; E value = 3E-56 BLAST hit in the rice genome = brain protein 44, putative, expressed
Probe for Locus	HAR35_16778
Locus	POPA2_0839