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GrainGenes Marker Report: POPA2_0848

Locus	POPA2_0848
Type	SNP
Synonym	Other name 11_20848 BOPA1_11_20848 BOPA1_4993-1008 Synonym 11_20848
Chromosome	6H
Chromosome Arm	6HL
Map	Hordeum-OPA-2009-6H 71.08 Hordeum-OPA123-2008-6H 71.08 Hordeum-OWB-OPA2008-6H 93.064
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008
Species	Hordeum vulgare
Probe	HAR35_17087 i_11_20848
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0848 Marker name in barley OPA1 = 11_20848 Original SNP name = 4993-1008 Most representative HarvEST:Barley Assembly #32 Unigene = 4993 Most representative HarvEST:Barley Assembly #35 Unigene = 17087 HarvEST Unigene 35 Probe Set = Contig6953_at Unigene 35 Rice Locus = Description for best rice BLAST hit to Unigene 35 member = ; E value = Marker name in barley Pilot OPA2 = 2_0848
Probe for Locus	HAR35_17087
Locus	POPA2_0848
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare