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GrainGenes Marker Report: POPA2_0935

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Locus	POPA2_0935
Type	SNP
Chromosome	3H
Chromosome Arm	3HS
Map	Hordeum-OPA-2009-3H 6.7 Hordeum-OPA123-2008-3H 6.7
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_3295
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_0935 Most representative HarvEST:Barley Assembly #32 Unigene = 5433 Most representative HarvEST:Barley Assembly #35 Unigene = 3295 HarvEST Unigene 35 Probe Set = Contig7367_at Unigene 35 Rice Locus = LOC_Os01g02600 Description for best rice BLAST hit to Unigene 35 member = Ser/Thr receptor-like kinase, putative, expressed; E value = 1E-101 Marker name in barley Pilot OPA2 = 2_0935 Original SNP name = 5433-534 Description for best rice BLAST hit to Unigene 35 member = protein Ser/Thr receptor-like kinase, putative, expressed; E value = 1E-101 BLAST hit in the rice genome = Ser/Thr receptor-like kinase, putative, expressed
Probe for Locus	HAR35_3295
Locus	POPA2_0935
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare