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GrainGenes Marker Report: POPA2_0951

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Locus	POPA2_0951
Type	SNP
Synonym	Other name 11_20951 BOPA1_11_20951 BOPA1_5514-472 Synonym 11_20951
Chromosome	1H
Chromosome Arm	1HS
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_17362 i_11_20951
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_0951 Marker name in barley OPA1 = 11_20951 Original SNP name = 5514-472 Most representative HarvEST:Barley Assembly #32 Unigene = 5514 Most representative HarvEST:Barley Assembly #35 Unigene = 17362 HarvEST Unigene 35 Probe Set = Contig7461_s_at Unigene 35 Rice Locus = LOC_Os05g01210 Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 2E-22 BLAST hit in the rice genome = expressed protein
Probe for Locus	HAR35_17362
Locus	POPA2_0951