GrainGenes Marker Report: POPA2_0970
Locus
POPA2_0970
Type
SNP
Synonym
Other name 11_20970 BOPA1_11_20970 BOPA1_5657-1187 Synonym 11_20970
Chromosome
3H
Chromosome Arm
3HS
Map
Hordeum-OPA-2009-3H 54.4 Hordeum-OPA123-2008-3H 54.4 Hordeum-OPAConsensus-2011-3H 67.86
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_17527 i_11_20970
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_0970 Marker name in barley OPA1 = 11_20970 Original SNP name = 5657-1187 Most representative HarvEST:Barley Assembly #32 Unigene = 5657 Most representative HarvEST:Barley Assembly #35 Unigene = 17527 HarvEST Unigene 35 Probe Set = HT07A03u_at; HT07A03u_x_at; rbags12j06_s_at Unigene 35 Rice Locus = LOC_Os01g18640 Marker name in barley Pilot OPA2 = 2_0970 HarvEST Unigene 35 Probe Set = HT07A03u_at, HT07A03u_x_at, rbags12j06_s_at Description for best rice BLAST hit to Unigene 35 member = protein isopenicillin N epimerase, putative, expressed; E value = 0 BLAST hit in the rice genome = isopenicillin N epimerase, putative, expressed
Probe for Locus
HAR35_17527
Locus
POPA2_0970
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_0970
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