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GrainGenes Marker Report: POPA2_0979

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Locus
POPA2_0979
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_49
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0979
Most representative HarvEST:Barley Assembly #32 Unigene = 571
Most representative HarvEST:Barley Assembly #35 Unigene = 49
HarvEST Unigene 35 Probe Set = Contig865_3_s_at; Contig865_5_s_at; HU06E17r_at; HZ48K22r_at; HZ48K22r_s_at
Unigene 35 Rice Locus = LOC_Os04g40950
Description for best rice BLAST hit to Unigene 35 member = glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3, putative, expressed; E value = 0
BLAST hit in the rice genome = glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3, putative, expressed



Probe for Locus
HAR35_49
Locus
POPA2_0979