GrainGenes Marker Report: POPA2_1024
Locus
POPA2_1024
Type
SNP
Synonym
Other name 11_21024 BOPA1_11_21024 BOPA1_5925-565 Synonym 11_21024
Chromosome
5H
Chromosome Arm
5HL
Map
Barley, 2012 9KSNP 5H 144.9 Hordeum-OPA-2009-5H 159.79 Hordeum-OPA123-2008-5H 159.79 Hordeum-OPAConsensus-2011-5H 155.66
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_420 i_11_21024
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_1024 Marker name in barley OPA1 = 11_21024 Original SNP name = 5925-565 Most representative HarvEST:Barley Assembly #32 Unigene = 5925 Most representative HarvEST:Barley Assembly #35 Unigene = 420 HarvEST Unigene 35 Probe Set = Contig7944_at Unigene 35 Rice Locus = LOC_Os04g10750 Description for best rice BLAST hit to Unigene 35 member = inorganic phosphate transporter 1-5, putative, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_1024 Description for best rice BLAST hit to Unigene 35 member = protein inorganic phosphate transporter 1-5, putative, expressed; E value = 0 BLAST hit in the rice genome = inorganic phosphate transporter 1-5, putative, expressed
Probe for Locus
HAR35_420
Locus
POPA2_1024 POPA1_0812
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1024
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