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GrainGenes Marker Report: POPA2_1042

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Locus
POPA2_1042
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_13820
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_1042
Most representative HarvEST:Barley Assembly #32 Unigene = 604
Most representative HarvEST:Barley Assembly #35 Unigene = 13820
HarvEST Unigene 35 Probe Set = Contig927_at
Unigene 35 Rice Locus = LOC_Os09g25160
Description for best rice BLAST hit to Unigene 35 member = retrotransposon protein, putative, unclassified; E value = 1E-59
BLAST hit in the rice genome = retrotransposon protein, putative, unclassified



Probe for Locus
HAR35_13820
Locus
POPA2_1042