GrainGenes Marker Report: POPA2_1044
Locus
POPA2_1044
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_16726
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 2_1044 Most representative HarvEST:Barley Assembly #32 Unigene = 6054 Most representative HarvEST:Barley Assembly #35 Unigene = 16726 HarvEST Unigene 35 Probe Set = Contig7949_s_at Unigene 35 Rice Locus = LOC_Os03g59040 Description for best rice BLAST hit to Unigene 35 member = squalene synthetase, putative, expressed; E value = 1E-178 BLAST hit in the rice genome = squalene synthetase, putative, expressed
Probe for Locus
HAR35_16726
Locus
POPA1_0820 POPA2_1044
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1044
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