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GrainGenes Marker Report: POPA2_1074

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Locus
POPA2_1074
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_3384
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_1074
Most representative HarvEST:Barley Assembly #32 Unigene = 6251
Most representative HarvEST:Barley Assembly #35 Unigene = 3384
HarvEST Unigene 35 Probe Set = Contig8348_at
Unigene 35 Rice Locus = LOC_Os03g57040
Description for best rice BLAST hit to Unigene 35 member = AP-1 complex subunit sigma-2, putative, expressed; E value = 9E-86
BLAST hit in the rice genome = AP-1 complex subunit sigma-2, putative, expressed



Probe for Locus
HAR35_3384
Locus
POPA2_1074