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GrainGenes Marker Report: POPA2_1093

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Locus	POPA2_1093
Type	SNP
Synonym	Other name 11_21093 BOPA1_11_21093 BOPA1_6354-1193 Synonym 11_21093
Chromosome	3H
Chromosome Arm	3HS
Map	Hordeum-OPAConsensus-2011-3H 59.83
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Species	Hordeum vulgare
Probe	HAR35_15656 i_11_21093
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_1093 Marker name in barley OPA1 = 11_21093 Original SNP name = 6354-1193 Most representative HarvEST:Barley Assembly #32 Unigene = 6354 Most representative HarvEST:Barley Assembly #35 Unigene = 15656 HarvEST Unigene 35 Probe Set = Contig9587_at Unigene 35 Rice Locus = LOC_Os01g08410 Description for best rice BLAST hit to Unigene 35 member = early fruit mRNA, putative, expressed; E value = 1E-131 BLAST hit in the rice genome = early fruit mRNA, putative, expressed
Probe for Locus	HAR35_15656
Locus	POPA2_1093