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GrainGenes Marker Report: POPA2_1095

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Locus	POPA2_1095
Type	SNP
Synonym	Other name 11_21095 BOPA1_11_21095 BOPA1_6382-396 Synonym 11_21095
Chromosome	1H
Map	Hordeum-OPAConsensus-2011-1H 35.77
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Species	Hordeum vulgare
Probe	HAR35_3837 i_11_21095
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_1095 Marker name in barley OPA1 = 11_21095 Original SNP name = 6382-396 Most representative HarvEST:Barley Assembly #32 Unigene = 6382 Most representative HarvEST:Barley Assembly #35 Unigene = 3837 HarvEST Unigene 35 Probe Set = Contig8666_at Unigene 35 Rice Locus = LOC_Os07g08970 Description for best rice BLAST hit to Unigene 35 member = expressed protein; E value = 0 BLAST hit in the rice genome = expressed protein
Probe for Locus	HAR35_3837
Locus	POPA2_1095