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GrainGenes Marker Report: POPA2_1119

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Locus
POPA2_1119
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_3946
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_1119
Most representative HarvEST:Barley Assembly #32 Unigene = 6558
Most representative HarvEST:Barley Assembly #35 Unigene = 3946
HarvEST Unigene 35 Probe Set = Contig8657_at; HVSMEf0020F06r2_s_at
Unigene 35 Rice Locus = LOC_Os01g47770
Description for best rice BLAST hit to Unigene 35 member = nudC domain-containing protein 2, putative, expressed; E value = 3E-83
BLAST hit in the rice genome = nudC domain-containing protein 2, putative, expressed



Probe for Locus
HAR35_3946
Locus
POPA2_1119