GrainGenes Marker Report: POPA2_1153
Locus
POPA2_1153
Type
SNP
Synonym
Other name 11_21153 BOPA1_11_21153 BOPA1_6846-1161 Synonym 11_21153
Chromosome
2H
Chromosome Arm
2HS
Map
Hordeum-OPA-2009-2H 40.94 Hordeum-OPA123-2008-2H 40.94 Hordeum-OPAConsensus-2011-2H 43.38
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_17899 i_11_21153
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_1153 Marker name in barley OPA1 = 11_21153 Original SNP name = 6846-1161 Most representative HarvEST:Barley Assembly #32 Unigene = 6846 Most representative HarvEST:Barley Assembly #35 Unigene = 17899 HarvEST Unigene 35 Probe Set = Contig8832_at Unigene 35 Rice Locus = LOC_Os07g47360 Description for best rice BLAST hit to Unigene 35 member = CW-type Zinc Finger family protein, expressed; E value = 1E-149 Marker name in barley Pilot OPA2 = 2_1153 Description for best rice BLAST hit to Unigene 35 member = protein CW-type Zinc Finger family protein, expressed; E value = 1E-149 BLAST hit in the rice genome = CW-type Zinc Finger family protein, expressed
Probe for Locus
HAR35_17899
Locus
POPA2_1153
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1153
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