GrainGenes Marker Report: POPA2_1196
Locus
POPA2_1196
Type
SNP
Chromosome
5H
Chromosome Arm
5HL
Map
Hordeum-OPA-2009-5H 147.67 Hordeum-OPA123-2008-5H 147.67
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe
HAR35_18388
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 2_1196 Most representative HarvEST:Barley Assembly #32 Unigene = 7120 Most representative HarvEST:Barley Assembly #35 Unigene = 18388 HarvEST Unigene 35 Probe Set = Contig9707_at Unigene 35 Rice Locus = Description for best rice BLAST hit to Unigene 35 member = ; E value = Marker name in barley Pilot OPA2 = 2_1196 Original SNP name = 7120-120
Probe for Locus
HAR35_18388
Locus
POPA2_1196
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1196
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