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GrainGenes Marker Report: POPA2_1244

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Locus	POPA2_1244
Type	SNP
Synonym	Other name 11_21244 BOPA1_11_21244 BOPA1_7568-443 Synonym 11_21244
Chromosome	5H
Chromosome Arm	5HL
Map	Hordeum-OPAConsensus-2011-5H 51.51
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Species	Hordeum vulgare
Probe	HAR35_4670 i_11_21244
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 2_1244 Marker name in barley OPA1 = 11_21244 Original SNP name = 7568-443 Most representative HarvEST:Barley Assembly #32 Unigene = 7568 Most representative HarvEST:Barley Assembly #35 Unigene = 4670 HarvEST Unigene 35 Probe Set = Contig10066_at Unigene 35 Rice Locus = LOC_Os09g15420 BLAST hit in the rice genome = UDP-glucose 4-epimerase GEPI48, putative, expressed
Probe for Locus	HAR35_4670
Locus	POPA2_1244