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GrainGenes Marker Report: POPA2_1287

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Locus	POPA2_1287
Type	SNP
Chromosome	7H
Chromosome Arm	7HS
Map	Barley, SFNB QTL 2017 7H 2.57 Barley-Core-2014_7H 2.47 Hordeum-OPA-2009-7H 2.57 Hordeum-OPA123-2008-7H 2.57 Hordeum-OPAConsensus-2011-7H 2.13
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Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, SFNB QTL 2017 Barley, USDA Core, 2014 Consensus
Probe	HAR35_19120
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_1287 Most representative HarvEST:Barley Assembly #32 Unigene = 7947 Most representative HarvEST:Barley Assembly #35 Unigene = 19120 HarvEST Unigene 35 Probe Set = Contig10327_at Unigene 35 Rice Locus = LOC_Os06g01980 Description for best rice BLAST hit to Unigene 35 member = cell division control protein 48 homolog C, putative, expressed; E value = 1E-111 Marker name in barley Pilot OPA2 = 2_1287 Original SNP name = 7947-887 Description for best rice BLAST hit to Unigene 35 member = protein cell division control protein 48 homolog C, putative, expressed; E value = 1E-111 BLAST hit in the rice genome = cell division control protein 48 homolog C, putative, expressed
Probe for Locus	HAR35_19120
Locus	POPA2_1287
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare