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GrainGenes Marker Report: POPA2_1316

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Locus	POPA2_1316
Type	SNP
Chromosome	7H
Chromosome Arm	7HS
Map	Hordeum-OPA-2009-7H 29.82 Hordeum-OPA123-2008-7H 29.82
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_4845
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_1316 Most representative HarvEST:Barley Assembly #32 Unigene = 8311 Most representative HarvEST:Barley Assembly #35 Unigene = 4845 HarvEST Unigene 35 Probe Set = Contig10832_s_at Unigene 35 Rice Locus = LOC_Os06g04910 Description for best rice BLAST hit to Unigene 35 member = hydrolase, NUDIX family protein, expressed; E value = 1E-127 Marker name in barley Pilot OPA2 = 2_1316 Original SNP name = 8311-580 Description for best rice BLAST hit to Unigene 35 member = protein hydrolase, NUDIX family protein, expressed; E value = 1E-127 BLAST hit in the rice genome = hydrolase, NUDIX family protein, expressed
Probe for Locus	HAR35_4845
Locus	POPA2_1316
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare