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GrainGenes Marker Report: POPA2_1331

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Locus	POPA2_1331
Type	SNP
Chromosome	4H
Chromosome Arm	4HL
Map	Barley-Core-2014_4H 93.72 Hordeum-OPA-2009-4H 95.85 Hordeum-OPA123-2008-4H 95.85 Hordeum-OPAConsensus-2011-4H 104.42
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe	HAR35_4368
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 2_1331 Most representative HarvEST:Barley Assembly #32 Unigene = 8438 Most representative HarvEST:Barley Assembly #35 Unigene = 4368 HarvEST Unigene 35 Probe Set = Contig10791_s_at Unigene 35 Rice Locus = LOC_Os03g05390 Description for best rice BLAST hit to Unigene 35 member = citrate transporter family protein, expressed; E value = 1E-146 Marker name in barley Pilot OPA2 = 2_1331 Original SNP name = 8438-784 Description for best rice BLAST hit to Unigene 35 member = protein citrate transporter family protein, expressed; E value = 1E-146 BLAST hit in the rice genome = citrate transporter family protein, expressed
Probe for Locus	HAR35_4368
Locus	POPA2_1331
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare