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GrainGenes Marker Report: POPA2_1364

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Locus
POPA2_1364
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_5272
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_1364
Most representative HarvEST:Barley Assembly #32 Unigene = 8767
Most representative HarvEST:Barley Assembly #35 Unigene = 5272
HarvEST Unigene 35 Probe Set = Contig11628_at
Unigene 35 Rice Locus = LOC_Os02g03580
Description for best rice BLAST hit to Unigene 35 member = transcription factor HBP-1a, putative, expressed; E value = 2E-92
BLAST hit in the rice genome = transcription factor HBP-1a, putative, expressed



Probe for Locus
HAR35_5272
Locus
POPA2_1364