GrainGenes Marker Report: POPA2_1373
Locus
POPA2_1373
Type
SNP
Synonym
Other name 11_21373 BOPA1_11_21373 BOPA1_8867-459 Synonym 11_21373
Chromosome
1H
Chromosome Arm
1HL
Map
Barley, 2012 9KSNP 1H 88.2 Hordeum-OPA-2009-1H 95.42 Hordeum-OPA123-2008-1H 95.42 Hordeum-OPAConsensus-2011-1H 96.95
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species
Hordeum vulgare
Probe
HAR35_19241 i_11_21373
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_1373 Marker name in barley OPA1 = 11_21373 Original SNP name = 8867-459 Most representative HarvEST:Barley Assembly #32 Unigene = 8867 Most representative HarvEST:Barley Assembly #35 Unigene = 19241 HarvEST Unigene 35 Probe Set = Contig11704_at Unigene 35 Rice Locus = LOC_Os05g36190 Description for best rice BLAST hit to Unigene 35 member = tubby-like protein, putative, expressed; E value = 1E-143 Marker name in barley Pilot OPA2 = 2_1373 Description for best rice BLAST hit to Unigene 35 member = protein tubby-like protein, putative, expressed; E value = 1E-143 BLAST hit in the rice genome = tubby-like protein, putative, expressed
Probe for Locus
HAR35_19241
Locus
POPA2_1373
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1373
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