GrainGenes Marker Report: POPA2_1456
Locus
POPA2_1456
Type
SNP
Chromosome
1H
Chromosome Arm
1HS
Map
Barley-Core-2014_1H 4.98 Hordeum-OPA-2009-1H 3.75 Hordeum-OPA123-2008-1H 3.75 Hordeum-OPAConsensus-2011-1H 4.71
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, USDA Core, 2014 Consensus
Probe
HAR35_5699
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 8 ] Marker name in barley Pilot OPA1 = 2_1456 Most representative HarvEST:Barley Assembly #32 Unigene = 9993 Most representative HarvEST:Barley Assembly #35 Unigene = 5699 HarvEST Unigene 35 Probe Set = Contig12924_at Unigene 35 Rice Locus = Description for best rice BLAST hit to Unigene 35 member = ; E value = Marker name in barley Pilot OPA2 = 2_1456 Original SNP name = 9993-409
Probe for Locus
HAR35_5699
Locus
POPA2_1456
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA2_1456
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