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GrainGenes Marker Report: POPA2_1466

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Locus	POPA2_1466
Type	SNP
Chromosome	2H
Map	Hordeum-OWB-OPA2008-2H 3.318
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OWB, OPA2008
Probe	HAR35_1247
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Remark	[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 2_1466 Most representative HarvEST:Barley Assembly #32 Unigene = 2583 Most representative HarvEST:Barley Assembly #35 Unigene = 1247 HarvEST Unigene 35 Probe Set = Contig3338_s_at; Contig3339_at Unigene 35 Rice Locus = LOC_Os04g02910 Description for best rice BLAST hit to Unigene 35 member = CP5, putative, expressed; E value = 3E-48 BLAST hit in the rice genome = CP5, putative, expressed
Probe for Locus	HAR35_1247
Locus	POPA2_1466
Synonym	Synonym cMWG682
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare