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GrainGenes Marker Report: POPA2_1479

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Locus	POPA2_1479
Type	SNP
Synonym	Other name 12_21479 BOPA2_12_21479 Synonym 12_21479
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_2066 i_12_21479
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_1479 Marker name in barley OPA1 = 12_21479 Original SNP name = ABC05772-1-1-482 Most representative HarvEST:Barley Assembly #32 Unigene = 4225 Most representative HarvEST:Barley Assembly #35 Unigene = 2066 HarvEST Unigene 35 Probe Set = Contig5772_at Unigene 35 Rice Locus = LOC_Os06g49120 Description for best rice BLAST hit to Unigene 35 member = nmrA-like family protein, expressed; E value = 0 BLAST hit in the rice genome = nmrA-like family protein, expressed
Probe for Locus	HAR35_2066
Locus	POPA2_1479 POPA1_1120