GrainGenes Marker Report: POPA2_1514
Locus
POPA2_1514
Type
SNP
Synonym
Synonym 11_21514
Chromosome
5H
Chromosome Arm
5HL
Map
Hordeum-OPAConsensus-2011-5H 147.49
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus
Probe
HAR35_23437
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 2_1514 Marker name in barley OPA1 = 11_21514 Original SNP name = ABC20733-1-7-311 Most representative HarvEST:Barley Assembly #32 Unigene = 17579 Most representative HarvEST:Barley Assembly #35 Unigene = 23437 HarvEST Unigene 35 Probe Set = Contig20733_at Unigene 35 Rice Locus = LOC_Os03g57970 Description for best rice BLAST hit to Unigene 35 member = lipid transfer protein, putative, expressed; E value = 2E-53 BLAST hit in the rice genome = lipid transfer protein, putative, expressed
Probe for Locus
HAR35_23437
Locus
POPA2_1514
GrainGenes Marker Report: POPA2_1514
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