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GrainGenes Marker Report: POPA2_1529

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Locus
POPA2_1529
Type
SNP
Chromosome
1H
Map
Barley-Core-2014_1H50
Hordeum-OPAConsensus-2011-1H45.2
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_16047
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 6 ]
Marker name in barley Pilot OPA1 = 2_1529
Most representative HarvEST:Barley Assembly #32 Unigene = 4192
Most representative HarvEST:Barley Assembly #35 Unigene = 16047
HarvEST Unigene 35 Probe Set = Contig5838_at
Unigene 35 Rice Locus = LOC_Os10g38495
BLAST hit in the rice genome = glutathione S-transferase GSTU6, putative, expressed



Probe for Locus
HAR35_16047
Locus
POPA2_1529