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GrainGenes Marker Report: POPA3_0012

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Locus
POPA3_0012
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14642
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0012
Most representative HarvEST:Barley Assembly #32 Unigene = 1580
Most representative HarvEST:Barley Assembly #35 Unigene = 14642
HarvEST Unigene 35 Probe Set = Contig2305_at
Unigene 35 Rice Locus = LOC_Os12g37350
Description for best rice BLAST hit to Unigene 35 member = lipoxygenase 2.2, chloroplast precursor, putative; E value = 1E-154
BLAST hit in the rice genome = lipoxygenase 2.2, chloroplast precursor, putative



Probe for Locus
HAR35_14642
Locus
POPA3_0012