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GrainGenes Marker Report: POPA3_0024

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Locus	POPA3_0024
Type	SNP
Chromosome	4H
Chromosome Arm	4HS
Map	Hordeum-OPA-2009-4H 0.74 Hordeum-OPA123-2008-4H 0.74
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_15521
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 3_0024 Most representative HarvEST:Barley Assembly #32 Unigene = 2854 Most representative HarvEST:Barley Assembly #35 Unigene = 15521 HarvEST Unigene 35 Probe Set = Contig4017_at; Contig4017_s_at Unigene 35 Rice Locus = LOC_Os01g42880 Marker name in barley Pilot OPA3 = 3_0024 Original SNP name = U32_87_319 HarvEST Unigene 35 Probe Set = Contig4017_at, Contig4017_s_at Description for best rice BLAST hit to Unigene 35 member = protein 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative, expressed; E value = 0 BLAST hit in the rice genome = 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative, expressed
Probe for Locus	HAR35_15521
Locus	POPA3_0024
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare