GrainGenes Marker Report: POPA3_0163
Locus
POPA3_0163
Type
SNP
Synonym
Synonym 12_30163
Chromosome
5H
Chromosome Arm
5HS
Map
Barley, SFNB QTL 2017 5H 0 Hordeum-OPA-2009-5H 0 Hordeum-OPA123-2008-5H 0 Hordeum-OPAConsensus-2011-5H 0 Hordeum-OWB-OPA2008-5H 0
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008 Barley, SFNB QTL 2017
Probe
HAR35_4182
Reference
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 13 ] Marker name in barley Pilot OPA1 = 3_0163 Marker name in barley OPA1 = 12_30163 Original SNP name = ABC11063_1_46 Most representative HarvEST:Barley Assembly #32 Unigene = 8597 Most representative HarvEST:Barley Assembly #35 Unigene = 4182 HarvEST Unigene 35 Probe Set = Contig11063_at; rbah43d09_s_at Unigene 35 Rice Locus = LOC_Os12g44380 Description for best rice BLAST hit to Unigene 35 member = sucrose transport protein SUC4, putative, expressed; E value = 0 Marker name in barley Pilot OPA3 = 3_0163 Marker name in barley OPA2 = 12_30163 HarvEST Unigene 35 Probe Set = Contig11063_at, rbah43d09_s_at Description for best rice BLAST hit to Unigene 35 member = protein sucrose transport protein SUC4, putative, expressed; E value = 0 BLAST hit in the rice genome = sucrose transport protein SUC4, putative, expressed
Probe for Locus
HAR35_4182
Locus
POPA3_0163
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA3_0163
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
| ||||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
| ||||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
| |||||||||||||||
|
|
