Query (optional)   in Class  

GrainGenes Marker Report: POPA3_0215

[Submit comment/correction]

Locus
POPA3_0215
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_1805
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0215
Most representative HarvEST:Barley Assembly #32 Unigene = 10521
Most representative HarvEST:Barley Assembly #35 Unigene = 1805
HarvEST Unigene 35 Probe Set = Contig13274_at; HVSMEn0016A20r2_at; HVSMEn0016A20r2_s_at
Unigene 35 Rice Locus = LOC_Os12g10320
Description for best rice BLAST hit to Unigene 35 member = plant-specific domain TIGR01627 family protein, expressed; E value = 1E-130
BLAST hit in the rice genome = plant-specific domain TIGR01627 family protein, expressed



Probe for Locus
HAR35_1805
Locus
POPA3_0215