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GrainGenes Marker Report: POPA3_0221

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Locus
POPA3_0221
Type
SNP
Synonym
Synonym12_30221
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_6592
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ]
Marker name in barley Pilot OPA1 = 3_0221
Marker name in barley OPA1 = 12_30221
Original SNP name = ABC13783_1_12_326
Most representative HarvEST:Barley Assembly #32 Unigene = 11273
Most representative HarvEST:Barley Assembly #35 Unigene = 6592
HarvEST Unigene 35 Probe Set = Contig13783_at
Unigene 35 Rice Locus = LOC_Os10g31540
Description for best rice BLAST hit to Unigene 35 member = glycine-rich cell wall structural protein 2 precursor, putative, expressed; E value = 1E-64
BLAST hit in the rice genome = glycine-rich cell wall structural protein 2 precursor, putative, expressed



Probe for Locus
HAR35_6592
Locus
POPA3_0221