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GrainGenes Marker Report: POPA3_0228

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Locus
POPA3_0228
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_20553
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0228
Most representative HarvEST:Barley Assembly #32 Unigene = 11719
Most representative HarvEST:Barley Assembly #35 Unigene = 20553
HarvEST Unigene 35 Probe Set = Contig14428_at; Contig14429_s_at
Unigene 35 Rice Locus = LOC_Os04g54940
Description for best rice BLAST hit to Unigene 35 member = ATEB1A, putative, expressed; E value = 1E-131
BLAST hit in the rice genome = ATEB1A, putative, expressed



Probe for Locus
HAR35_20553
Locus
POPA3_0228