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GrainGenes Marker Report: POPA3_0324

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Locus	POPA3_0324
Type	SNP
Chromosome	6H
Chromosome Arm	6HL
Map	Hordeum-OPA-2009-6H 92.45 Hordeum-OPA123-2008-6H 92.45 Hordeum-OWB-OPA2008-6H 115.075
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008
Probe	HAR35_18856
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 10 ] Marker name in barley Pilot OPA1 = 3_0324 Most representative HarvEST:Barley Assembly #32 Unigene = 10882 Most representative HarvEST:Barley Assembly #35 Unigene = 18856 HarvEST Unigene 35 Probe Set = Unigene 35 Rice Locus = LOC_Os03g22410 Description for best rice BLAST hit to Unigene 35 member = GTP binding protein, putative, expressed; E value = 1E-36 Marker name in barley Pilot OPA3 = 3_0324 Original SNP name = U32_10882_110 Description for best rice BLAST hit to Unigene 35 member = protein GTP binding protein, putative, expressed; E value = 1E-36 BLAST hit in the rice genome = GTP binding protein, putative, expressed
Probe for Locus	HAR35_18856
Locus	POPA3_0324
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare