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GrainGenes Marker Report: POPA3_0332

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Locus
POPA3_0332
Type
SNP
Chromosome
3H
Map
Barley-Core-2014_3H11.94
Hordeum-OPAConsensus-2011-3H13.13
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_6958
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0332
Most representative HarvEST:Barley Assembly #32 Unigene = 11504
Most representative HarvEST:Barley Assembly #35 Unigene = 6958
HarvEST Unigene 35 Probe Set =
Unigene 35 Rice Locus = LOC_Os01g03914
Description for best rice BLAST hit to Unigene 35 member = metal tolerance protein C3, putative, expressed; E value = 4E-48
BLAST hit in the rice genome = metal tolerance protein C3, putative, expressed



Probe for Locus
HAR35_6958
Locus
POPA3_0332