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GrainGenes Marker Report: POPA3_0349

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Locus
POPA3_0349
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14789
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0349
Most representative HarvEST:Barley Assembly #32 Unigene = 1220
Most representative HarvEST:Barley Assembly #35 Unigene = 14789
HarvEST Unigene 35 Probe Set = Contig1816_at
Unigene 35 Rice Locus = LOC_Os07g11380
Description for best rice BLAST hit to Unigene 35 member = seed allergenic protein RAG2 precursor, putative, expressed; E value = 5E-40
BLAST hit in the rice genome = seed allergenic protein RAG2 precursor, putative, expressed



Probe for Locus
HAR35_14789
Locus
POPA3_0349