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GrainGenes Marker Report: POPA3_0501

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Locus
POPA3_0501
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_1871
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0501
Most representative HarvEST:Barley Assembly #32 Unigene = 3661
Most representative HarvEST:Barley Assembly #35 Unigene = 1871
HarvEST Unigene 35 Probe Set = Contig5094_s_at; Contig5095_at
Unigene 35 Rice Locus = LOC_Os12g25210
Description for best rice BLAST hit to Unigene 35 member = signal peptidase complex subunit 1, putative; E value = 7E-45
BLAST hit in the rice genome = signal peptidase complex subunit 1, putative



Probe for Locus
HAR35_1871
Locus
POPA3_0501