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GrainGenes Marker Report: POPA3_0606

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Locus	POPA3_0606
Type	SNP
Synonym	Other name 12_30606 BOPA2_12_30606 Synonym 12_30606
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_354 i_12_30606
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_0606 Marker name in barley OPA1 = 12_30606 Original SNP name = U32_563_543 Most representative HarvEST:Barley Assembly #32 Unigene = 563 Most representative HarvEST:Barley Assembly #35 Unigene = 354 HarvEST Unigene 35 Probe Set = Unigene 35 Rice Locus = LOC_Os12g19470 Description for best rice BLAST hit to Unigene 35 member = ribulose bisphosphate carboxylase small chain C, chloroplast precursor, putative, expressed; E value = 4E-76 BLAST hit in the rice genome = ribulose bisphosphate carboxylase small chain C, chloroplast precursor, putative, expressed
Probe for Locus	HAR35_354
Locus	POPA3_0606