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GrainGenes Marker Report: POPA3_0738

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Locus
POPA3_0738
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_14228
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0738
Most representative HarvEST:Barley Assembly #32 Unigene = 82
Most representative HarvEST:Barley Assembly #35 Unigene = 14228
HarvEST Unigene 35 Probe Set = Contig1797_at; Contig1797_x_at
Unigene 35 Rice Locus = LOC_Os02g41650
Description for best rice BLAST hit to Unigene 35 member = phenylalanine ammonia-lyase, putative, expressed; E value = 0
BLAST hit in the rice genome = phenylalanine ammonia-lyase, putative, expressed



Probe for Locus
HAR35_14228
Locus
POPA3_0738
Synonym
SynonymCDO215
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare